STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVP23BGolgi apparatus membrane protein TVP23 homolog. (187 aa)    
Predicted Functional Partners:
TMEM60
Transmembrane protein 60.
      
 0.794
PIGW
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
      
 0.621
CNIH4
Cornichon family AMPA receptor auxiliary protein 4.
      
 0.621
ULK2
Unc-51 like autophagy activating kinase 2.
    
   0.572
ULK1
Unc-51 like autophagy activating kinase 1.
    
   0.572
YIPF3
Yip1 domain family member 3.
   
 
 0.561
PEX11B
Peroxisomal biogenesis factor 11 beta.
   
  
 0.492
PPIG
Peptidylprolyl isomerase G.
      
 0.457
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.