STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHN1Chimerin 1. (459 aa)    
Predicted Functional Partners:
NCK2
Cytoplasmic protein.
    
 0.709
MNS1
Meiosis specific nuclear structural 1.
    
 
 0.680
RAC1
Rac family small GTPase 1.
    
 0.513
RAC3
Rac family small GTPase 3.
    
 0.513
RAC2
Rac family small GTPase 2.
    
 0.513
HEMK1
HemK methyltransferase family member 1.
    
   0.501
CDC42
Cell division cycle 42.
    
 0.482
CTSC
Cathepsin C; Belongs to the peptidase C1 family.
      
 0.481
NCAPG
Non-SMC condensin I complex subunit G.
   
  
 0.473
RAP1B
RAP1B, member of RAS oncogene family.
    
 0.451
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.