STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1C1Solute carrier organic anion transporter family member. (725 aa)    
Predicted Functional Partners:
SLC16A10
Solute carrier family 16 member 10.
   
 
 0.708
SLC16A2
Solute carrier family 16 member 2.
   
 
 0.675
FADS6
Fatty acid desaturase 6.
      
 0.671
SLC5A11
Solute carrier family 5 member 11.
   
  
 0.670
SLC28A3
Sodium/nucleoside cotransporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
      
 0.665
U3I0P0_ANAPP
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.632
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
      
 0.611
KBTBD2
Kelch repeat and BTB domain containing 2.
      
 0.586
MCHR1
Melanin concentrating hormone receptor 1.
      
 0.504
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
      
 0.457
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.