STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1C1Solute carrier organic anion transporter family member. (725 aa)    
Predicted Functional Partners:
U3I9L3_ANAPP
Solute carrier organic anion transporter family member.
  
  
 
0.902
SLC5A11
Solute carrier family 5 member 11.
   
  
 0.691
SLC28A3
Sodium/nucleoside cotransporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
      
 0.686
SLC16A10
Solute carrier family 16 member 10.
   
 
 0.652
FADS6
Fatty acid desaturase 6.
      
 0.620
U3I0P0_ANAPP
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.605
SLC16A2
Solute carrier family 16 member 2.
   
 
 0.574
MCHR1
Melanin concentrating hormone receptor 1.
      
 0.546
CRYM
Crystallin mu.
      
 0.495
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
      
 0.464
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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