STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT4FAT atypical cadherin 4. (4188 aa)    
Predicted Functional Partners:
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit.
      
 0.670
B4GALT1
Beta-1,4-galactosyltransferase 1.
      
 0.670
FJX1
Four-jointed box kinase 1.
   
 
 0.664
VANGL2
Vang-like protein.
    
 0.658
CTNNB1
Catenin beta 1.
    
 0.615
JUP
Junction plakoglobin.
    
 0.561
FAT2
FAT atypical cadherin 2.
   
0.512
RHOV
Ras homolog family member V.
    
 0.512
APOB
Apolipoprotein B.
   
  
 0.496
FAT1
FAT atypical cadherin 1.
  
0.464
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.