STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC1APOC1 centriolar protein A. (396 aa)    
Predicted Functional Partners:
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.770
CENPW
Centromere protein W.
   
 
 0.769
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.767
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.747
WDR82
WD repeat domain 82.
   
 0.706
HCFC2
Host cell factor C2.
    
 0.682
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.651
PHF20
PHD finger protein 20.
    
 0.642
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.634
ZBTB38
Zinc finger and BTB domain containing 38.
    
 0.619
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.