STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC1APOC1 centriolar protein A. (396 aa)    
Predicted Functional Partners:
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.804
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.802
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.801
CENPW
Centromere protein W.
   
 0.766
HCFC2
Host cell factor C2.
   
 0.694
ENSAPLP00000028245
Uncharacterized protein.
    
 0.694
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.675
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
 
  
 0.601
KAT2B
Lysine acetyltransferase 2B.
   
 0.598
KAT2A
Lysine acetyltransferase 2A.
   
 0.598
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.