STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGT1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone. (336 aa)    
Predicted Functional Partners:
HSP90AA1
Uncharacterized protein.
   
 0.984
NOD1
Nucleotide binding oligomerization domain containing 1.
    
 0.949
U3IRD8_ANAPP
Uncharacterized protein.
    
 0.922
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 
 0.919
ENSAPLP00000021501
HATPase_c domain-containing protein.
   
 0.851
ENSAPLP00000025272
Uncharacterized protein.
   
 0.851
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.842
TSC1
TSC complex subunit 1.
   
 0.799
TRAP1
TNF receptor associated protein 1.
   
 0.799
ENSAPLP00000025464
Uncharacterized protein.
   
 0.799
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.