Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP24Matrix metallopeptidase 24. (747 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.767
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.675
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.649
SEMA4A
Semaphorin 4A; Belongs to the semaphorin family.
      
 0.595
TGFBR3
Transforming growth factor beta receptor 3.
    
 0.590
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
    
 0.580
ENSAPLP00000020204
Uncharacterized protein.
    
 0.580
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.565
PADI2
Peptidyl arginine deiminase 2.
   
  
 0.551
CACNA2D1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
      
 0.538
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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