STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYBMYB proto-oncogene, transcription factor. (762 aa)    
Predicted Functional Partners:
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.900
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.879
LIN54
Lin-54 DREAM MuvB core complex component.
    
 0.701
LIN54-2
Uncharacterized protein.
    
 0.701
MYC
Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
   
 
 0.651
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.648
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.648
E2F5
E2F transcription factor 5.
   
 0.646
E2F4
E2F_TDP domain-containing protein.
   
 0.646
MRPL15
Mitochondrial ribosomal protein L15.
    
 
 0.643
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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