STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPC1NPC intracellular cholesterol transporter 1. (1285 aa)    
Predicted Functional Partners:
NPC2
NPC intracellular cholesterol transporter 2.
   
 0.992
SREBF2
Sterol regulatory element binding transcription factor 2.
   
 0.752
SREBF1
Uncharacterized protein.
   
 0.752
ENSAPLP00000023723
BHLH domain-containing protein.
   
 0.751
MYCN
MYCN proto-oncogene, bHLH transcription factor.
   
 0.694
INSIG1
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis. Belongs to the INSIG family.
   
 0.634
INSIG2
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis.
   
 0.634
IRS4
Insulin receptor substrate 4.
   
  
 0.633
LAMP1
Lysosomal associated membrane protein 1.
    
 
 0.616
CROT
Carnitine O-octanoyltransferase.
   
  
 0.578
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.