USP32 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

USP32

Uncharacterized protein; Belongs to the peptidase C19 family. (1593 aa)

Predicted Functional Partners:

FAM162B

0.871

TMEM167A

0.857

APPBP2

0.681

YPEL5

0.671

GUSB

0.669

USP14

0.668

SCFD1

0.645

CDC16

0.641

HPS6

0.619

U3IEG1_ANAPP

0.610

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APPBP2	HPS6	ENSAPLP00000007800	ENSAPLP00000011967	Amyloid beta precursor protein binding protein 2.	HPS6 biogenesis of lysosomal organelles complex 2 subunit 3.	0.861
APPBP2	USP32	ENSAPLP00000007800	ENSAPLP00000007451	Amyloid beta precursor protein binding protein 2.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.681
CDC16	USP32	ENSAPLP00000012150	ENSAPLP00000007451	Cell division cycle 16.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.641
FAM162B	SCFD1	ENSAPLP00000024008	ENSAPLP00000031237	Family with sequence similarity 162 member B.	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	0.769
FAM162B	TMEM167A	ENSAPLP00000024008	ENSAPLP00000015866	Family with sequence similarity 162 member B.	Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.	0.863
FAM162B	USP32	ENSAPLP00000024008	ENSAPLP00000007451	Family with sequence similarity 162 member B.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.871
FAM162B	YPEL5	ENSAPLP00000024008	ENSAPLP00000008641	Family with sequence similarity 162 member B.	Protein yippee-like; Belongs to the yippee family.	0.759
GUSB	USP32	ENSAPLP00000012214	ENSAPLP00000007451	Glucuronidase beta.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.669
HPS6	APPBP2	ENSAPLP00000011967	ENSAPLP00000007800	HPS6 biogenesis of lysosomal organelles complex 2 subunit 3.	Amyloid beta precursor protein binding protein 2.	0.861
HPS6	USP32	ENSAPLP00000011967	ENSAPLP00000007451	HPS6 biogenesis of lysosomal organelles complex 2 subunit 3.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.619
SCFD1	FAM162B	ENSAPLP00000031237	ENSAPLP00000024008	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	Family with sequence similarity 162 member B.	0.769
SCFD1	TMEM167A	ENSAPLP00000031237	ENSAPLP00000015866	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.	0.676
SCFD1	USP32	ENSAPLP00000031237	ENSAPLP00000007451	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.645
SCFD1	YPEL5	ENSAPLP00000031237	ENSAPLP00000008641	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	Protein yippee-like; Belongs to the yippee family.	0.554
TMEM167A	FAM162B	ENSAPLP00000015866	ENSAPLP00000024008	Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.	Family with sequence similarity 162 member B.	0.863
TMEM167A	SCFD1	ENSAPLP00000015866	ENSAPLP00000031237	Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	0.676
TMEM167A	USP32	ENSAPLP00000015866	ENSAPLP00000007451	Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.857
TMEM167A	YPEL5	ENSAPLP00000015866	ENSAPLP00000008641	Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.	Protein yippee-like; Belongs to the yippee family.	0.756
U3IEG1_ANAPP	USP14	ENSAPLP00000005633	ENSAPLP00000000573	Josephin domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.589
U3IEG1_ANAPP	USP32	ENSAPLP00000005633	ENSAPLP00000007451	Josephin domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.610