STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELZHelicase with zinc finger. (1941 aa)    
Predicted Functional Partners:
INO80D
INO80 complex subunit D.
   
 
 0.650
BRWD1
Uncharacterized protein.
   
 0.640
ENSAPLP00000021917
Uncharacterized protein.
   
 0.640
ZBTB44
Zinc finger and BTB domain containing 44.
    
 0.618
NECAP1
NECAP endocytosis associated 1.
      
 0.611
ZBTB41
Zinc finger and BTB domain containing 41.
      
 0.611
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.606
RC3H2
Ring finger and CCCH-type domains 2.
   
 
 0.605
YOD1
YOD1 deubiquitinase.
      
 0.586
SNX16
Sorting nexin 16.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.