STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM50Tripartite motif containing 50. (501 aa)    
Predicted Functional Partners:
CAV3
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
   
 0.793
MYOF
Myoferlin.
     
 0.608
DYSF
Dysferlin.
     
 0.608
TRIM23
Tripartite motif containing 23.
    
 0.594
RPS27A
Ubiquitin-like domain-containing protein.
    
  0.574
WDR53
WD_REPEATS_REGION domain-containing protein.
      
 0.574
NBAS
Neuroblastoma amplified sequence.
    
 
 0.557
UBE2H
Ubiquitin conjugating enzyme E2 H.
    
 
 0.549
UBE2H-2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.549
GTF2IRD1
GTF2I repeat domain containing 1.
      
 0.508
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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