STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3IJR4_ANAPPWD_REPEATS_REGION domain-containing protein. (568 aa)    
Predicted Functional Partners:
CDRT1
Uncharacterized protein.
 
      0.873
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.760
RBX1
Ring-box 1.
    
 0.744
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.743
WSB2
WD repeat and SOCS box containing 2.
  
 
  0.622
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.602
COMMD1
Copper metabolism domain containing 1.
    
  0.564
CAND1
Cullin associated and neddylation dissociated 1.
    
 0.546
CAND2
Cullin associated and neddylation dissociated 2 (putative).
    
 0.546
SPSB3
SplA/ryanodine receptor domain and SOCS box containing 3.
   
  0.544
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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