STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIGMAR1Sigma non-opioid intracellular receptor 1. (213 aa)    
Predicted Functional Partners:
CYP51A1
Cytochrome P450 family 51 subfamily A member 1; Belongs to the cytochrome P450 family.
   
 
 0.967
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.964
DHCR7
7-dehydrocholesterol reductase.
   
 
 0.905
LBR
Lamin B receptor.
   
 
 0.905
SQLE
SE domain-containing protein.
   
 
 0.894
ENSAPLP00000028634
FAD_binding_3 domain-containing protein.
   
 
 0.894
SC5D
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.887
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.848
MSMO1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.848
FAXDC2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 0.848
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.