STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAND2Heart and neural crest derivatives expressed 2. (204 aa)    
Predicted Functional Partners:
EDN1
Endothelin 1.
      
 0.754
SMYD1
SET and MYND domain containing 1.
    
 0.748
NKX2-5
NK2 homeobox 5.
   
 0.735
VCL
Vinculin.
      
 0.710
TBX20
Uncharacterized protein.
   
 
 0.697
U3J4V3_ANAPP
Homeobox domain-containing protein.
    
 0.684
PHOX2B
Paired like homeobox 2B.
   
 
 0.674
TBX5
T-box transcription factor 5.
    
 0.671
TXN
Thioredoxin; Belongs to the thioredoxin family.
      
 0.667
HOXD13
Homeobox D13.
    
 
 0.665
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.