STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM189A1Family with sequence similarity 189 member A1. (734 aa)    
Predicted Functional Partners:
NDFIP2
Nedd4 family interacting protein 2.
   
  
 0.637
N4BP1
NEDD4 binding protein 1.
      
 0.636
RNF212
Uncharacterized protein.
      
 0.625
NDFIP1
Nedd4 family interacting protein 1.
   
  
 0.613
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.594
ITCH
E3 ubiquitin-protein ligase.
    
 0.575
FGFRL1
Fibroblast growth factor receptor like 1.
      
 0.545
RAB3IP
Sec2p domain-containing protein.
    
 0.505
RAB3IL1
RAB3A interacting protein like 1.
    
 0.505
ENSAPLP00000028736
Homeobox domain-containing protein.
      
 0.491
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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