STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTTHuntingtin. (3080 aa)    
Predicted Functional Partners:
SNCA
Alpha-synuclein; Belongs to the synuclein family.
   
 
 0.827
CREBBP
CREB binding protein.
   
 0.819
OPTN
Optineurin.
    
 
 0.786
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.758
TRAK1
Trafficking kinesin protein 1.
    
 
 0.744
ARMC10
Armadillo repeat containing 10.
   
 0.743
ENSAPLP00000025042
Ig-like domain-containing protein.
    
   0.720
U3IEG1_ANAPP
Josephin domain-containing protein.
    
 
 0.719
TARDBP
TAR DNA binding protein.
    
 
 0.717
HIP1
Huntingtin interacting protein 1.
    
 
 0.706
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.