Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR16Proline rich 16. (301 aa)    
Predicted Functional Partners:
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.665
TMEM154
Transmembrane protein 154.
      
 0.623
MORN5
MORN repeat containing 5.
      
 0.613
DPH5
Diphthamide biosynthesis 5.
      
 0.594
PHOX2A
Homeobox domain-containing protein.
      
 0.547
CACHD1
Cache domain containing 1.
      
 0.546
SNCAIP
Synuclein alpha interacting protein.
      
 0.545
DOCK10
Dedicator of cytokinesis 10; Belongs to the DOCK family.
      
 0.544
KCNT2
Potassium sodium-activated channel subfamily T member 2.
      
 0.485
PELI2
Pellino E3 ubiquitin protein ligase family member 2.
      
 0.485
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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