U3IK07_ANAPP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

U3IK07_ANAPP

Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (605 aa)

Predicted Functional Partners:

PYCR3

0.930

PYCR1

0.930

P4HA2

0.906

P4HA1

0.906

P4HA3

0.906

LAP3

0.900

U3IT68_ANAPP

0.766

ALDH4A1

0.766

OAT

0.748

ALDH18A1

0.692

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDH18A1	ALDH4A1	ENSAPLP00000005957	ENSAPLP00000032561	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Aldedh domain-containing protein.	0.976
ALDH18A1	OAT	ENSAPLP00000005957	ENSAPLP00000015307	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.999
ALDH18A1	P4HA2	ENSAPLP00000005957	ENSAPLP00000002913	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Prolyl 4-hydroxylase subunit alpha 2.	0.527
ALDH18A1	P4HA3	ENSAPLP00000005957	ENSAPLP00000019336	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	P4Ha_N domain-containing protein.	0.528
ALDH18A1	PYCR1	ENSAPLP00000005957	ENSAPLP00000023163	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	P5CR_dimer domain-containing protein.	0.840
ALDH18A1	PYCR3	ENSAPLP00000005957	ENSAPLP00000008180	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	P5CR_dimer domain-containing protein.	0.903
ALDH18A1	U3IK07_ANAPP	ENSAPLP00000005957	ENSAPLP00000007579	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.692
ALDH18A1	U3IT68_ANAPP	ENSAPLP00000005957	ENSAPLP00000010441	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Aldedh domain-containing protein.	0.773
ALDH4A1	ALDH18A1	ENSAPLP00000032561	ENSAPLP00000005957	Aldedh domain-containing protein.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.976
ALDH4A1	OAT	ENSAPLP00000032561	ENSAPLP00000015307	Aldedh domain-containing protein.	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.962
ALDH4A1	PYCR1	ENSAPLP00000032561	ENSAPLP00000023163	Aldedh domain-containing protein.	P5CR_dimer domain-containing protein.	0.927
ALDH4A1	PYCR3	ENSAPLP00000032561	ENSAPLP00000008180	Aldedh domain-containing protein.	P5CR_dimer domain-containing protein.	0.927
ALDH4A1	U3IK07_ANAPP	ENSAPLP00000032561	ENSAPLP00000007579	Aldedh domain-containing protein.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.766
LAP3	P4HA1	ENSAPLP00000007097	ENSAPLP00000009016	Leucine aminopeptidase 3.	Prolyl 4-hydroxylase subunit alpha 1.	0.900
LAP3	P4HA2	ENSAPLP00000007097	ENSAPLP00000002913	Leucine aminopeptidase 3.	Prolyl 4-hydroxylase subunit alpha 2.	0.900
LAP3	P4HA3	ENSAPLP00000007097	ENSAPLP00000019336	Leucine aminopeptidase 3.	P4Ha_N domain-containing protein.	0.900
LAP3	PYCR1	ENSAPLP00000007097	ENSAPLP00000023163	Leucine aminopeptidase 3.	P5CR_dimer domain-containing protein.	0.906
LAP3	PYCR3	ENSAPLP00000007097	ENSAPLP00000008180	Leucine aminopeptidase 3.	P5CR_dimer domain-containing protein.	0.916
LAP3	U3IK07_ANAPP	ENSAPLP00000007097	ENSAPLP00000007579	Leucine aminopeptidase 3.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.900
OAT	ALDH18A1	ENSAPLP00000015307	ENSAPLP00000005957	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.999