Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNNM1Cyclin and CBS domain divalent metal cation transport mediator 1. (598 aa)    
Predicted Functional Partners:
SPATA4
Spermatogenesis associated 4.
      
 0.665
PTP4A1
Protein tyrosine phosphatase 4A1.
    
 
 0.651
PTP4A2
Protein tyrosine phosphatase 4A2.
    
 
 0.651
ARL15
ADP ribosylation factor like GTPase 15.
   
 
 0.632
PTCHD4
Patched domain containing 4.
      
 0.606
UTP18
UTP18 small subunit processome component.
      
 0.593
GMPS
Guanine monophosphate synthase.
    
 0.565
HPSE2
Heparanase 2 (inactive).
      
 0.544
COX11
Cytochrome c oxidase copper chaperone COX11.
      
 0.544
TYW5
tRNA-yW synthesizing protein 5.
      
 0.536
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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