STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD109CD109 molecule. (1443 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.602
EMP1
Epithelial membrane protein 1.
   
  
 0.592
CBX4
Chromobox 4.
    
 0.564
CD36
CD36 molecule; Belongs to the CD36 family.
     
 0.545
CBX2
Chromobox 2.
    
 0.527
KRT15
Keratin 15; Belongs to the intermediate filament family.
    
 0.513
BMI1
RING-type domain-containing protein.
    
 0.512
PCGF2
Polycomb group ring finger 2.
    
 0.512
SCMH1
Scm polycomb group protein homolog 1.
    
 0.510
SCML2
Scm polycomb group protein like 2.
    
 0.510
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.