U3IK23_ANAPP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

U3IK23_ANAPP

Uncharacterized protein. (270 aa)

Predicted Functional Partners:

U3IYQ3_ANAPP

0.960

MAOA

0.958

DDC

0.949

DBH

0.943

COMT

0.941

PNMT

0.941

CYP1B1

0.928

ENSAPLP00000017423

0.918

ENSAPLP00000026493

0.918

ENSAPLP00000016406

0.908

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COMT	CYP1B1	ENSAPLP00000002241	ENSAPLP00000000825	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Cytochrome P450 family 1 subfamily B member 1; Belongs to the cytochrome P450 family.	0.955
COMT	DBH	ENSAPLP00000002241	ENSAPLP00000006776	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Dopamine beta-hydroxylase.	0.959
COMT	DDC	ENSAPLP00000002241	ENSAPLP00000002755	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Dopa decarboxylase.	0.958
COMT	ENSAPLP00000016406	ENSAPLP00000002241	ENSAPLP00000016406	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Uncharacterized protein.	0.908
COMT	ENSAPLP00000017423	ENSAPLP00000002241	ENSAPLP00000017423	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.924
COMT	ENSAPLP00000026493	ENSAPLP00000002241	ENSAPLP00000026493	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.924
COMT	MAOA	ENSAPLP00000002241	ENSAPLP00000013107	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Amine oxidase.	0.967
COMT	PNMT	ENSAPLP00000002241	ENSAPLP00000025136	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Phenylethanolamine N-methyltransferase.	0.946
COMT	U3IK23_ANAPP	ENSAPLP00000002241	ENSAPLP00000007595	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Uncharacterized protein.	0.941
COMT	U3IYQ3_ANAPP	ENSAPLP00000002241	ENSAPLP00000012379	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	Amine oxidase.	0.964
CYP1B1	COMT	ENSAPLP00000000825	ENSAPLP00000002241	Cytochrome P450 family 1 subfamily B member 1; Belongs to the cytochrome P450 family.	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	0.955
CYP1B1	ENSAPLP00000016406	ENSAPLP00000000825	ENSAPLP00000016406	Cytochrome P450 family 1 subfamily B member 1; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.904
CYP1B1	U3IK23_ANAPP	ENSAPLP00000000825	ENSAPLP00000007595	Cytochrome P450 family 1 subfamily B member 1; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.928
DBH	COMT	ENSAPLP00000006776	ENSAPLP00000002241	Dopamine beta-hydroxylase.	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	0.959
DBH	DDC	ENSAPLP00000006776	ENSAPLP00000002755	Dopamine beta-hydroxylase.	Dopa decarboxylase.	0.965
DBH	MAOA	ENSAPLP00000006776	ENSAPLP00000013107	Dopamine beta-hydroxylase.	Amine oxidase.	0.961
DBH	PNMT	ENSAPLP00000006776	ENSAPLP00000025136	Dopamine beta-hydroxylase.	Phenylethanolamine N-methyltransferase.	0.988
DBH	U3IK23_ANAPP	ENSAPLP00000006776	ENSAPLP00000007595	Dopamine beta-hydroxylase.	Uncharacterized protein.	0.943
DBH	U3IYQ3_ANAPP	ENSAPLP00000006776	ENSAPLP00000012379	Dopamine beta-hydroxylase.	Amine oxidase.	0.926
DDC	COMT	ENSAPLP00000002755	ENSAPLP00000002241	Dopa decarboxylase.	Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.	0.958