STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD5FYVE, RhoGEF and PH domain containing 5. (1004 aa)    
Predicted Functional Partners:
WDR76
WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family.
    
 
 0.661
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
      
 0.655
RAPGEF5
Rap guanine nucleotide exchange factor 5.
      
 0.655
RIMS2
C2 domain-containing protein.
      
 0.655
COPS7B
COP9 signalosome subunit 7B.
      
 0.655
CAMTA1
Calmodulin binding transcription activator 1.
      
 0.655
BARHL2
BarH like homeobox 2.
      
 0.634
CTNNAL1
Catenin alpha like 1.
      
 0.539
LANCL3
LanC like 3.
      
 0.521
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.503
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.