STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NISCHNischarin. (1322 aa)    
Predicted Functional Partners:
RAB25
RAB25, member RAS oncogene family.
    
 0.665
ENSAPLP00000024408
Uncharacterized protein.
   
 
 0.646
RAB21
RAB21, member RAS oncogene family.
      
 0.611
RND2
Rho family GTPase 2.
    
  0.572
RND3
Rho family GTPase 3.
    
  0.534
CHST12
Carbohydrate sulfotransferase.
      
 0.532
PLD1
Phospholipase.
     
 0.500
MAPK1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 
 0.494
YARS2
Tyrosine--tRNA ligase.
      
 0.480
SOX11
Transcription factor SOX.
      
 0.461
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.