STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHST11Carbohydrate sulfotransferase. (350 aa)    
Predicted Functional Partners:
CHST13
Carbohydrate sulfotransferase.
  
  
 
0.901
CHST12
Carbohydrate sulfotransferase.
     
0.900
CHST7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.856
CHST15
Uncharacterized protein.
      
 0.699
COP1
COP1 E3 ubiquitin ligase.
      
 0.694
CSGALNACT1
Hexosyltransferase.
      
 0.666
NDST2
Uncharacterized protein.
      
 0.665
UST
Uronyl 2-sulfotransferase.
      
 0.641
EXTL2
Exostosin like glycosyltransferase 2.
      
 0.636
CSGALNACT2
Hexosyltransferase.
      
 0.619
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.