STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM117BFamily with sequence similarity 117 member B. (240 aa)    
Predicted Functional Partners:
KDM5B
Lysine demethylase 5B.
      
 0.706
ENSAPLP00000023120
Uncharacterized protein.
 
      0.627
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
    
 
 0.575
AMER1
APC membrane recruitment protein 1.
      
 0.521
EFCAB11
EF-hand calcium binding domain 11.
      
 0.493
ICA1
Islet cell autoantigen 1.
      
 0.475
N4BP1
NEDD4 binding protein 1.
   
  
 0.461
SLC35B1
Solute carrier family 35 member B1.
 
    
 0.460
ZCCHC2
Zinc finger CCHC-type containing 2.
      
 0.453
RNF169
Ring finger protein 169.
      
 0.422
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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