Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
CTDSPL2CTD small phosphatase like 2. (468 aa)    
Predicted Functional Partners:
KPNA4
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.650
CNEP1R1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
   
 0.608
LPIN3
Lipin 3.
    
 0.601
LPIN1
Lipin 1.
    
 0.601
LPIN2
Lipin 2.
    
 0.601
ENSAPLP00000028132
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.596
KLHDC1
Kelch domain containing 1.
   
  
 0.554
GTF2F2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.552
POLR2D
RPOL4c domain-containing protein.
    
 0.549
DCAF6
DDB1 and CUL4 associated factor 6.
    
 
 0.546
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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