Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDST2Uncharacterized protein. (879 aa)    
Predicted Functional Partners:
EXT2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
    
 
 0.866
CSGALNACT1
Hexosyltransferase.
   
  
 0.849
RBKS
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
      
 0.721
PLB1
Uncharacterized protein.
      
 0.719
CHST13
Carbohydrate sulfotransferase.
   
  
 0.666
CHST11
Carbohydrate sulfotransferase.
      
 0.665
CHST12
Carbohydrate sulfotransferase.
      
 0.664
GLCE
Glucuronic acid epimerase.
   
 
 0.658
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.633
RNF123
Ring finger protein 123.
     
  0.622
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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