STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD19Potassium channel tetramerization domain containing 19. (1005 aa)    
Predicted Functional Partners:
GNL3
G protein nucleolar 3.
  
 0.943
NOP58
NOP58 ribonucleoprotein.
  
 
 0.934
WDR12
WD repeat domain 12.
   
 0.924
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.893
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.891
PUM3
Pumilio RNA binding family member 3.
   
 
 0.876
RPF2
Ribosome production factor 2 homolog.
   
 
 0.871
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.869
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.869
EBNA1BP2
EBNA1 binding protein 2.
   
 0.867
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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