STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D16TBC1 domain family member 16. (787 aa)    
Predicted Functional Partners:
RAB4A
Uncharacterized protein.
    
 0.728
ENSAPLP00000024027
annotation not available
    
 0.728
TBC1D19
TBC1 domain family member 19.
      
 0.666
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent 1L.
      
 0.666
DGKE
Diacylglycerol kinase.
      
 0.665
PCGF5
Polycomb group ring finger 5.
      
 0.664
CDC16
Cell division cycle 16.
      
 0.638
PLA2G6
Phospholipase A2 group VI.
      
 0.634
WDR5B
WD repeat domain 5B.
      
 0.589
TBC1D7
Uncharacterized protein.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.