STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX5Peroxisomal biogenesis factor 5. (645 aa)    
Predicted Functional Partners:
PEX7
Peroxisomal biogenesis factor 7.
    
 0.993
SCP2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.992
PEX14
Peroxisomal biogenesis factor 14.
   
 0.961
NBR1
NBR1 autophagy cargo receptor.
    
 0.951
HACL1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
  
 0.949
PEX13
Peroxisomal biogenesis factor 13.
   
 0.934
HSDL2
Hydroxysteroid dehydrogenase like 2.
   
 0.926
ECI2
Enoyl-CoA delta isomerase 2.
   
 0.926
ATM
Non-specific serine/threonine protein kinase.
    
 0.920
PEX5L
Peroxisomal biogenesis factor 5 like.
  
 
0.908
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.