STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R16BProtein phosphatase 1 regulatory subunit 16B. (571 aa)    
Predicted Functional Partners:
GPT2
Glutamic--pyruvic transaminase 2.
 
 
   0.826
DHX35
DEAH-box helicase 35.
   
 0.791
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.765
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
   
 0.765
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.754
RWDD1
RWD domain containing 1.
      
 0.749
CDHR3
Uncharacterized protein.
    
 0.619
SLC22A7
Solute carrier family 22 member 7.
      
 0.611
VASH1
Vasohibin 1.
      
 0.586
PANK1
Pantothenate kinase 1.
      
 0.516
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.