STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL48Mitochondrial ribosomal protein L48. (179 aa)    
Predicted Functional Partners:
MRPL51
Mitochondrial ribosomal protein L51.
   
 
 0.924
MRPL34
Uncharacterized protein.
   
 
 0.914
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.912
MRPS14
Mitochondrial ribosomal protein S14.
   
 
 0.909
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.905
MRPL46
Mitochondrial ribosomal protein L46.
   
   0.899
MRPS22
Mitochondrial ribosomal protein S22.
   
 
 0.895
U3IF54_ANAPP
RF_PROK_I domain-containing protein.
   
 
 0.889
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.884
ENSAPLP00000032669
Uncharacterized protein.
   
 
 0.877
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.