STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDH14Retinol dehydrogenase 14; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (326 aa)    
Predicted Functional Partners:
RDH5
Retinol dehydrogenase 5.
  
 
 0.722
BBOX1
Gamma-butyrobetaine hydroxylase 1.
   
  
 0.612
TPBG
Trophoblast glycoprotein.
    
 
 0.589
RLBP1
Retinaldehyde binding protein 1.
    
 0.550
RBP2
Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.548
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
 
      0.502
RGR
Retinal G protein coupled receptor.
   
 
 0.501
DHRS7C
Dehydrogenase/reductase 7C; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.498
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.484
RPE65
Retinoid isomerohydrolase RPE65.
   
  
 0.483
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.