STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA4ATP binding cassette subfamily A member 4. (1939 aa)    
Predicted Functional Partners:
NR1H3
Nuclear receptor subfamily 1 group H member 3.
    
 0.751
UGT8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
      
 0.602
CHL1
Cell adhesion molecule L1 like.
      
 0.600
FA2H
Fatty acid 2-hydroxylase; Belongs to the sterol desaturase family.
   
  
 0.590
CDYL2
Chromodomain Y like 2.
   
  
 0.589
PIP4K2A
Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.
      
 0.584
TMEM50A
Transmembrane protein 50A.
    
 
 0.574
RPE65
Retinoid isomerohydrolase RPE65.
      
 0.570
PRKACB
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
  0.568
USH2A
Usherin.
   
  
 0.562
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.