STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB2DNA-binding protein SATB. (710 aa)    
Predicted Functional Partners:
CUX1
Homeobox protein cut-like.
    
 
 0.759
TBR1
Uncharacterized protein.
   
  
 0.757
ENSAPLP00000018750
Uncharacterized protein.
   
  
 0.757
FEZF2
FEZ family zinc finger 2.
    
 0.753
PAX6
Paired box 6.
      
 0.696
SOX5
SRY-box transcription factor 5.
      
 0.678
CUX2
Homeobox protein cut-like.
    
 
 0.651
NEUROD6
Neuronal differentiation 6.
   
  
 0.639
FOXP2
Forkhead box P2.
    
 
 0.630
BCL11B
BAF chromatin remodeling complex subunit BCL11B.
   
 0.621
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.