Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SLC25A28Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. (177 aa)    
Predicted Functional Partners:
FXN
Frataxin.
    
 
 0.773
ENSAPLP00000018502
SNRNP27 domain-containing protein.
      
 0.503
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
  
 0.502
ABCB7
ATP binding cassette subfamily B member 7.
    
 
 0.492
MRS2
Magnesium transporter MRS2.
   
 
 0.490
SLC11A2
Solute carrier family 11 member 2.
   
  
 0.447
CTLA4
Cytotoxic T-lymphocyte associated protein 4.
      
 0.434
ISCU
Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
   
  
 0.426
ABCB8
ATP binding cassette subfamily B member 8.
    
 
 0.415
BRD7
Bromodomain containing 7.
      
 0.409
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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