Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMP5Charged multivesicular body protein 5. (219 aa)    
Predicted Functional Partners:
VTA1
Vesicle trafficking 1.
   
 0.999
U3HZV8_ANAPP
Uncharacterized protein.
   
 0.996
CHMP2B
Charged multivesicular body protein 2B.
   
 0.995
CHMP4B
Charged multivesicular body protein 4B.
  
0.991
CHMP4C
Charged multivesicular body protein 4C.
  
0.991
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.990
CHMP1A
Charged multivesicular body protein 1A.
   
 0.986
CHMP1B
Charged multivesicular body protein 1B.
   
 0.986
ENSAPLP00000027644
Uncharacterized protein.
    
 0.979
ENSAPLP00000017876
Uncharacterized protein.
   
 0.978
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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