STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRX2Paired related homeobox 2. (141 aa)    
Predicted Functional Partners:
C9orf78
Chromosome 9 open reading frame 78.
      
 0.611
TOR1B
Torsin family 1 member B.
      
 0.593
FKBP10
Peptidylprolyl isomerase.
   
  
 0.509
BEND2
Uncharacterized protein.
      
 0.477
METTL11B
Methyltransferase like 11B.
      
 0.475
EFEMP1
EGF containing fibulin extracellular matrix protein 1.
   
 
 0.453
THBS1
Thrombospondin 1.
   
 
 0.450
SPDEF
SAM pointed domain containing ETS transcription factor.
      
 0.446
TBX18
T-box transcription factor 18.
   
 
 0.441
ENSAPLP00000025521
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
      
 0.437
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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