STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCXScleraxis bHLH transcription factor. (175 aa)    
Predicted Functional Partners:
MKX
Mohawk homeobox.
    
 
 0.581
FBN1
Fibrillin 1.
     
 0.541
MEOX1
Mesenchyme homeobox 1.
    
 
 0.516
FGFR1
Fibroblast growth factor receptor.
      
 0.480
FGFR3
Fibroblast growth factor receptor.
      
 0.480
PRRX1
Paired related homeobox 1.
    
 0.457
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
      
 0.453
SOX9
SRY-box transcription factor 9.
    
 
 0.451
U3IFJ6_ANAPP
Uncharacterized protein.
    
 0.447
PAX1
Paired box 1.
      
 0.445
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.