STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC6Coiled-coil domain containing 6. (324 aa)    
Predicted Functional Partners:
KDELR2
ER lumen protein-retaining receptor.
      
 0.731
LRIG3
Leucine rich repeats and immunoglobulin like domains 3.
      
 0.624
GSG1L
BEN domain-containing protein.
      
 0.620
MED27
Mediator complex subunit 27.
      
 0.620
ENSAPLP00000018477
Metallophos domain-containing protein.
    
 
 0.620
COPS7A
COP9 signalosome subunit 7A.
      
 0.620
SLC25A25
Solute carrier family 25 member 25; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.620
CEP85L
Centrosomal protein 85 like.
      
 0.611
SLC34A2
Solute carrier family 34 member 2.
      
 0.611
TPM3
Tropomyosin 3; Belongs to the tropomyosin family.
      
 0.610
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.