STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABTB2Ankyrin repeat and BTB domain containing 2. (1016 aa)    
Predicted Functional Partners:
RELL1
RELT like 1.
      
 0.546
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.493
UBXN7
UBX domain-containing protein 7.
    
 0.491
MRPL47
Mitochondrial ribosomal protein L47.
      
 0.484
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.482
GPR22
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.478
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.475
SLC35E3
Solute carrier family 35 member E3.
      
 0.452
NUAK1
NUAK family kinase 1.
      
 0.452
UPF1
UPF1 RNA helicase and ATPase.
      
 0.443
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.