STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP6Acid phosphatase 6, lysophosphatidic; Belongs to the histidine acid phosphatase family. (455 aa)    
Predicted Functional Partners:
MRPL28
Mitochondrial ribosomal protein L28.
      
 0.626
CYP39A1
Cytochrome P450 family 39 subfamily A member 1; Belongs to the cytochrome P450 family.
    
 
 0.615
ABHD2
Abhydrolase domain containing 2.
   
  
 0.613
SLC25A33
Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.610
TBL1X
Uncharacterized protein.
      
 0.609
RBM20
RNA binding motif protein 20.
    
 
 0.586
RFT1
Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family.
      
 0.491
U3I0T2_ANAPP
Glyco_tran_10_N domain-containing protein.
      
 0.479
ACP1
Acid phosphatase 1.
      
 0.456
PLK4
Polo like kinase 4.
    
 0.449
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.