Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBR1Uncharacterized protein. (231 aa)    
Predicted Functional Partners:
ENSAPLP00000018750
Uncharacterized protein.
 
     0.918
EOMES
Eomesodermin.
 
      0.896
ENSAPLP00000024399
Uncharacterized protein.
 
 
  
 0.830
ENSAPLP00000017199
Uncharacterized protein.
 
      0.804
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 
 0.773
SRGAP2
Uncharacterized protein.
      
 0.719
FOXP2
Forkhead box P2.
    
 
 0.673
FOXP2-2
Uncharacterized protein.
    
 
 0.673
FOXG1
Forkhead box G1.
   
 
 0.653
PAX6
Paired box 6.
   
 0.643
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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