STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAC1UBA domain containing 1. (437 aa)    
Predicted Functional Partners:
RNF123
Ring finger protein 123.
   
 
 0.853
VIM
Vimentin; Belongs to the intermediate filament family.
      
 0.749
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
 
    
 0.682
U3IN70_ANAPP
Uncharacterized protein.
      
 0.626
UBL7
Ubiquitin like 7.
    
 0.540
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
 0.499
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
      
 0.497
IMPG2
Interphotoreceptor matrix proteoglycan 2.
      
 0.489
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.480
PMPCA
Peptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family.
   
  
 0.459
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.