STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1CBSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)    
Predicted Functional Partners:
PPP1R12A
Protein phosphatase 1 regulatory subunit.
   
 0.975
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.965
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.960
RB1
RB transcriptional corepressor 1.
   
 0.959
CPSF3
Uncharacterized protein.
   
 0.958
GYS2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 0.956
WDR82
WD repeat domain 82.
    
 0.949
CPSF4
Cleavage and polyadenylation specific factor 4.
    
 0.943
U3ILW1_ANAPP
Fip1 domain-containing protein.
    
 0.941
RBL2
RB transcriptional corepressor like 2.
   
 0.936
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.