STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYW5tRNA-yW synthesizing protein 5. (152 aa)    
Predicted Functional Partners:
BZW1
Basic leucine zipper and W2 domains 1.
      
 0.748
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.747
AOX1
Aldehyde oxidase 1.
   
  
 0.613
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.553
EPAS1
Endothelial PAS domain protein 1.
    
 0.553
NPAS3
Neuronal PAS domain protein 3.
    
 0.553
U3IWF3_ANAPP
Flavodoxin-like domain-containing protein.
      
 0.544
TYW3
tRNA-yW synthesizing protein 3 homolog.
      
 0.542
RIOX2
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.493
JMJD8
Jumonji domain containing 8.
      
 0.489
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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