STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1Target of myb1 membrane trafficking protein; Belongs to the TOM1 family. (490 aa)    
Predicted Functional Partners:
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.710
KCTD15
Potassium channel tetramerization domain containing 15.
      
 0.700
TOLLIP
Toll interacting protein.
    
 
 0.671
UEVLD
Uncharacterized protein.
   
 
 0.643
COMMD6
COMM domain containing 6.
      
 0.630
RABGEF1
Uncharacterized protein.
     
 0.592
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.575
MST1R
Macrophage stimulating 1 receptor.
    
  0.575
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.570
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.570
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.