STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1Target of myb1 membrane trafficking protein; Belongs to the TOM1 family. (490 aa)    
Predicted Functional Partners:
TOLLIP
Toll interacting protein.
   
 
 0.846
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.835
KCTD15
Potassium channel tetramerization domain containing 15.
      
 0.719
CUEDC1
CUE domain containing 1.
    
   0.702
COMMD6
COMM domain containing 6.
      
 0.604
ENSAPLP00000023897
Uncharacterized protein.
    
   0.596
HMGXB4
HMG-box containing 4.
 
    
 0.595
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.589
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.589
ENSAPLP00000017049
Uncharacterized protein.
    
  0.570
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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