STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAFD1TRAF-type zinc finger domain containing 1. (620 aa)    
Predicted Functional Partners:
NPLOC4
UN_NPL4 domain-containing protein.
    
 
 0.833
SSH1
Slingshot protein phosphatase 1.
   
 0.712
KMT2E
Lysine methyltransferase 2E.
    
 0.699
IQGAP2
IQ motif containing GTPase activating protein 2.
    
 0.697
PPA2
Pyrophosphatase (inorganic) 2.
    
 
 0.671
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.658
PHF11
PHD finger protein 11.
   
 0.636
ZNFX1
Zinc finger NFX1-type containing 1.
   
  
 0.615
IFRD1
Interferon related developmental regulator 1.
     
 0.615
HELZ2
Helicase with zinc finger 2.
   
 0.612
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.