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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX49DEAD-box helicase 49; Belongs to the DEAD box helicase family. (437 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
   
 0.993
NOL6
Nucleolar protein 6.
   
 0.973
DHX37
DEAH-box helicase 37.
   
 0.966
UTP25
UTP25 small subunit processor component.
   
 
 0.961
PDCD11
Programmed cell death 11.
   
 0.954
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.952
UTP14A
Uncharacterized protein.
   
 0.947
DDX52
Uncharacterized protein.
   
 0.946
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.942
NOP14
NOP14 nucleolar protein.
   
 0.933
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.